资源列表

Wgsim

版本: 功能类别: simulating sequence reads from a reference genome

软件简介:

Wgsim is a small tool for simulating sequence reads from a reference genome. It is able to simulate diploid genomes with SNPs and insertion/deletion (INDE... 下载软件>>

Trimmomatic

版本: V0.38 功能类别: A flexible read trimming tool for Illumina NGS data

软件简介:

A flexible read trimming tool for Illumina NGS data 下载软件>>

LUMPY

版本: V0.2.13 功能类别: LUMPY

软件简介:

This is LUMPY 0.2.13 with additional changes to allow lumpyexpress to function when the main file is a CRAM, not a BAM. The splitters and discordants must... 下载软件>>

snpEff

版本: V4.3 功能类别: a fast variant effect predictor (SNP, MNP and InDels) fo...

软件简介:

snpEff is a fast variant effect predictor (SNP, MNP and InDels) for genomic data. It is integrated with Galaxy so it can be used either as a command line ... 下载软件>>

MACS

版本: V2.1.2 功能类别: ChIP-Seq data

软件简介:

With the improvement of sequencing techniques, chromatin immunoprecipitation followed by high throughput sequencing (ChIP-Seq) is getting popular to study... 下载软件>>

ASprofile

版本: V1.0 功能类别: ASprofile is a suite of programs for extracting, quantify...

软件简介:

ASprofile consists of several programs for extracting (extract-as), quantifying (extract-as-fpkm) and comparing (collect-fpkm) AS events from transcripts ... 下载软件>>

Plant MetGenMAP

版本: V7.0 功能类别: identify changed pathways and enriched GO terms from gen...

软件简介:

Plant MetGenMAP Plant MetGenMAP is a visualization and analysis package that allows to identify changed pathways and enriched GO terms from gene expressi... 下载软件>>